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Epitranscriptomics & Cancer Adaptation : A.David

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Our research work focuses on the contribution of post-transcriptional mechanisms on cancer cell adaptation, in particular RNA epigenetic & translational control.

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Added by jacques.colinge
Group name EquipeJC
Item Type Journal Article
Title Detection of soluble biomarkers of pancreatic cancer in endoscopic ultrasound-guided fine-needle aspiration samples
Creator Souche et al.
Author Guillaume Tosato
Author Benjamin Rivière
Author Jean-Christophe Valats
Author Antoine Debourdeau
Author Nicolas Flori
Author Didier Pourquier
Author Jean-Michel Fabre
Author Eric Assenat
Author Jacques Colinge
Author Andrei Turtoi
Abstract BACKGROUND: Biomarkers are urgently needed for pancreatic ductal adenocarcinoma (PDAC). Endoscopic ultrasound-guided fine-needle aspiration (EUS-FNA) is the cornerstone for diagnosing PDAC. We developed a method for discovery of PDAC biomarkers using the discarded EUS-FNA liquid. METHODS: This retrospective study included 58 patients with suspected pancreatic lesions who underwent EUS-FNA. Protein extracts from EUS-FNA liquid were analyzed by mass spectrometry. Proteomic and clinical data were modeled by supervised statistical learning to identify protein markers and clinical variables that distinguish PDAC. RESULTS: Statistical modeling revealed a protein signature for PDAC screening that achieved high sensitivity and specificity (0.92, 95?% confidence interval [CI] 0.79-0.98, and 0.85, 95?%CI 0.67-0.93, respectively). We also developed a protein signature score (PSS) to guide PDAC diagnosis. In combination with patient age, the PSS achieved 100?% certainty in correctly identifying PDAC patients?>?54 years. In addition, 3?/4 inconclusive EUS-FNA biopsies were correctly identified using PSS. CONCLUSIONS: EUS-FNA-derived fluid is a rich source of PDAC proteins with biomarker potential. The PSS requires further validation and verification of the feasibility of measuring these proteins in patient sera.
Publication Endoscopy
Volume 54
Issue 5
Pages 503-508
Date 2022-05
Journal Abbr Endoscopy
Language eng
DOI 10.1055/a-1550-2503
ISSN 1438-8812
Library Catalog PubMed
Extra PMID: 34448184
Tags Biomarkers, Carcinoma, Pancreatic Ductal, corresponding, Endoscopic Ultrasound-Guided Fine Needle Aspiration, Humans, Middle Aged, original, Pancreatic Neoplasms, phd, Retrospective Studies
Date Added 2022/07/29 - 09:14:08
Date Modified 2024/09/08 - 17:08:21
Notes and Attachments PubMed entry (Attachment)


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