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Epitranscriptomics & Cancer Adaptation : A.David

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Our research work focuses on the contribution of post-transcriptional mechanisms on cancer cell adaptation, in particular RNA epigenetic & translational control.

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Group name EquipePC
Item Type Journal Article
Title A Dual Protein-mRNA Localization Screen Reveals Compartmentalized Translation and Widespread Co-translational RNA Targeting
Creator Chouaib et al.
Author Racha Chouaib
Author Adham Safieddine
Author Xavier Pichon
Author Arthur Imbert
Author Oh Sung Kwon
Author Aubin Samacoits
Author Abdel-Meneem Traboulsi
Author Marie-Cécile Robert
Author Nikolay Tsanov
Author Emeline Coleno
Author Ina Poser
Author Christophe Zimmer
Author Anthony Hyman
Author Hervé Le Hir
Author Kazem Zibara
Author Marion Peter
Author Florian Mueller
Author Thomas Walter
Author Edouard Bertrand
Abstract Local translation allows spatial control of gene expression. Here, we performed a dual protein-mRNA localization screen, using smFISH on 523 human cell lines expressing GFP-tagged genes. 32 mRNAs displayed specific cytoplasmic localizations with local translation at unexpected locations, including cytoplasmic protrusions, cell edges, endosomes, Golgi, the nuclear envelope, and centrosomes, the latter being cell-cycle-dependent. Automated classification of mRNA localization patterns revealed a high degree of intercellular heterogeneity. Surprisingly, mRNA localization frequently required ongoing translation, indicating widespread co-translational RNA targeting. Interestingly, while P-body accumulation was frequent (15 mRNAs), four mRNAs accumulated in foci that were distinct structures. These foci lacked the mature protein, but nascent polypeptide imaging showed that they were specialized translation factories. For ?-catenin, foci formation was regulated by Wnt, relied on APC-dependent polysome aggregation, and led to nascent protein degradation. Thus, translation factories uniquely regulate nascent protein metabolism and create a fine granular compartmentalization of translation.
Publication Developmental Cell
Volume 54
Issue 6
Pages 773-791.e5
Date 2020-09-28
Journal Abbr Dev Cell
Language eng
DOI 10.1016/j.devcel.2020.07.010
ISSN 1878-1551
Library Catalog PubMed
Extra PMID: 32783880
Tags ASPM, Beta-catenin, Cell Line, Centrosome, co-translational targeting, Gene Expression Regulation, Humans, local translation, original, Polyribosomes, Protein Biosynthesis, Protein Transport, RNA, RNA localization, RNA transport, RNA, Messenger, smFISH, translation factories
Date Added 2023/11/15 - 18:34:42
Date Modified 2023/11/15 - 18:35:15
Notes and Attachments PubMed entry (Attachment)
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