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Epitranscriptomics & Cancer Adaptation : A.David

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Our research work focuses on the contribution of post-transcriptional mechanisms on cancer cell adaptation, in particular RNA epigenetic & translational control.

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Added by pmartino
Group name EquipePM
Item Type Journal Article
Title The landscape of cancer-associated fibroblasts in colorectal cancer liver metastases
Creator Giguelay et al.
Author Ambre Giguelay
Author Evgenia Turtoi
Author Lakhdar Khelaf
Author Guillaume Tosato
Author Ikrame Dadi
Author Tommy Chastel
Author Marie-Alix Poul
Author Marine Pratlong
Author Stefan Nicolescu
Author Dany Severac
Author Antoine Adenis
Author Olivia Sgarbura
Author Sébastien Carrère
Author Philippe Rouanet
Author Marc Ychou
Author Didier Pourquier
Author Pierre-Emmanuel Colombo
Author Andrei Turtoi
Author Jacques Colinge
Abstract Rationale: Patients with colorectal cancer die mainly due to liver metastases (CRC-LM). Although the tumor microenvironment (TME) plays an important role in tumor development and therapeutic response, our understanding of the individual TME components, especially cancer-associated fibroblasts (CAFs), remains limited. Methods: We analyzed CRC-LM CAFs and cancer cells by single-cell transcriptomics and used bioinformatics for data analysis and integration with related available single-cell and bulk transcriptomic datasets. We validated key findings by RT-qPCR, western blotting, and immunofluorescence. Results: By single-cell transcriptomic analysis of 4,397 CAFs from six CRC-LM samples, we identified two main CAF populations, contractile CAFs and extracellular matrix (ECM)-remodeling/pro-angiogenic CAFs, and four subpopulations with distinct phenotypes. We found that ECM-remodeling/pro-angiogenic CAFs derive from portal resident fibroblasts. They associate with areas of strong desmoplastic reaction and Wnt signaling in low-proliferating tumor cells engulfed in a stiff extracellular matrix. By integrating public single-cell primary liver tumor data, we propose a model to explain how different liver malignancies recruit CAFs of different origins to this organ. Lastly, we found that LTBP2 plays an important role in modulating collagen biosynthesis, ECM organization, and adhesion pathways. We developed fully human antibodies against LTBP2 that depleted LTBP2+ CAFs in vitro. Conclusion: This study complements recent reports on CRC-LM CAF heterogeneity at the single-cell resolution. The number of sequenced CAFs was more than one order of magnitude larger compared to existing data. LTBP2 targeting by antibodies might create opportunities to deplete ECM-remodeling CAFs in CRC-LMs. This might be combined with other therapies, e.g., anti-angiogenic compounds as already done in CRC. Moreover, we showed that in intrahepatic cholangiocarcinoma, in which ECM-remodeling CAF proportion is similar to that of CRC-LM, several genes expressed by ECM-remodeling CAFs, such as LTBP2, were associated with survival.
Publication Theranostics
Volume 12
Issue 17
Pages 7624-7639
Date 2022
Journal Abbr Theranostics
Language eng
DOI 10.7150/thno.72853
ISSN 1838-7640
Library Catalog PubMed
Extra PMID: 36438498 PMCID: PMC9691344
Tags CAF, Colorectal Neoplasms, Fibroblasts, Humans, Latent TGF-beta Binding Proteins, liver metastasis, Liver Neoplasms, LTBP2., original, single-cell, Tumor Microenvironment
Date Added 2023/02/25 - 11:49:36
Date Modified 2024/03/01 - 09:41:48
Notes and Attachments Full Text (Attachment)
PubMed entry (Attachment)
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